@article {4798, title = {Phylogenetic generic classification of parmelioid lichens (Parmeliaceae, Ascomycota) based on molecular, morphological and chemical evidence}, journal = {Taxon}, volume = {59}, year = {2010}, pages = {1735-1753}, url = {http://www.jstor.org/stable/41059870}, author = {Crespo, A. and Kauff, F. and Divakar, P.K. and del Prado, R. and P{\'e}rez-Ortega, S. and Amo de Paz, G. and Ferencova, Z. and Blanco, O. and Roca-Valiente, B. and N{\'u}{\~n}ez-Zapata, J. and Cubas, P. and Arg{\"u}ello, A. and Elix, J.A. and Esslinger, T.L. and Hawksworth, D.L. and Millanes, A.M. and Molina, M. Carmen and Wedin, M. and Ahti, T. and Aptroot, A. and Barreno, E. and Bungartz, F. and Calvelo, S. and Candan, M. and Cole, M. and Ertz, D. and Goffinet, B. and Lindblom, L. and L{\"u}cking, R. and Lutzoni, F. and Mattsson, J.-E. and Messuti, M.I. and Miadlikowska, J. and Piercey-Normore, M.D. and Rico, V.J. and Sipman, H.J.M. and Schmitt, I. and Spribille, T. and Thell, A. and Thor, G. and Upreti, D. and Lumbsch, H.T.} } @article {4689, title = {Miocene and Pliocene dominated diversification of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota) and Pleistocene population expansions}, journal = {BMC Evolutionary Biology}, volume = {12}, year = {2012}, pages = {18 pp.}, issn = {1471-2148}, doi = {10.1186/1471-2148-12-176}, url = {http://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2148-12-176}, author = {Leavitt, S.D. and Esslinger, T.L. and Divakar, P.K. and Lumbsch, H.T.} } @article {4688, title = {The sister-group relationships of the largest family~of~lichenized fungi, Parmeliaceae (Lecanorales,~Ascomycota)}, journal = {Fungal Biology}, volume = {117}, year = {2013}, pages = {715-721}, issn = {18786146}, doi = {10.1016/j.funbio.2013.08.001}, url = {http://linkinghub.elsevier.com/retrieve/pii/S1878614613001177}, author = {Singh, G. and Divakar, P.K. and Dal Grande, F. and Otte, J. and Parnmen, S. and Wedin, M. and Crespo, A. and Lumbsch, H.T. and Schmitt, I.} } @article {4666, title = {Diversification of the newly recognized lichen-forming fungal lineage Montanelia (Parmeliaceae, Ascomycota) and its relation to key geological and climatic events}, journal = {American Journal of Botany}, volume = {99}, year = {2012}, pages = {2014-2026}, issn = {0002-9122}, doi = {10.3732/ajb.1200258}, url = {http://doi.wiley.com/10.3732/ajb.1200258}, author = {Divakar, P.K. and Del-Prado, R. and Lumbsch, H.T. and Wedin, M. and Esslinger, T.L. and Leavitt, S.D. and Crespo, A.} } @article {4657, title = {Molecular sequence data from populations of Bryoria fuscescens s. lat. in the mountains of central Spain indicates a mismatch between haplotypes and chemotypes}, journal = {Lichenologist}, volume = {47}, year = {2015}, pages = {279-286}, issn = {0024-2829}, doi = {10.1017/S0024282915000274}, url = {http://www.journals.cambridge.org/abstract_S0024282915000274}, author = {Boluda, C.G. and Rico, V.J. and Crespo, A. and Divakar, P.K. and Hawksworth, D.L.} } @article {4645, title = {Coalescent-based species delimitation approach uncovers high cryptic diversity in the cosmopolitan lichen-forming fungal genus Protoparmelia (Lecanorales, Ascomycota)}, journal = {PLOS ONE}, volume = {10}, year = {2015}, pages = {e0124625}, doi = {10.1371/journal.pone.0124625}, url = {http://dx.plos.org/10.1371/journal.pone.0124625}, author = {Singh, G. and Dal Grande, F. and Divakar, P.K. and Otte, J. and Leavitt, S.D. and Szczepanska, K. and Crespo, A. and Rico, V.J. and Aptroot, A. and C{\'a}ceres, M.E. da Silva and Lumbsch, H.T. and Schmitt, I.}, editor = {Fontaneto, D.} } @article {4574, title = {Molecular studies on Punctelia species of the Iberian Peninsula, with an emphasis on specimens newly colonizing Madrid}, journal = {Lichenologist}, volume = {36}, year = {1999}, pages = {299-308}, issn = {0024-2829}, doi = {10.1017/S0024282904014434}, url = {https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S0024282904014434}, author = {Crespo, A. and Divakar, P.K. and Arg{\"u}ello, A. and Gasca, C. and Hawksworth, D.L.} } @article {4573, title = {Genetic distances within and among species in monophyletic lineages of Parmeliaceae (Ascomycota) as a tool for taxon delimitation}, journal = {Molecular Phylogenetics and Evolution}, volume = {56}, year = {2010}, pages = {125-133}, issn = {10557903}, doi = {10.1016/j.ympev.2010.04.014}, url = {http://linkinghub.elsevier.com/retrieve/pii/S1055790310001685}, author = {Del-Prado, R. and Cubas, P. and Lumbsch, H.T. and Divakar, P.K. and Blanco, O. and de Paz, G. Amo and Molina, M.C. and Crespo, A.} } @article {4495, title = {Circumscription of the genus Lepra, a recently resurrected genus to accommodate the {\textquotedblleft}Variolaria{\textquotedblright}-group of Pertusaria sensu lato (Pertusariales, Ascomycota)}, journal = {PLoS ONE}, volume = {12}, year = {2017}, pages = {e0180284}, doi = {10.1371/journal.pone.018028410}, url = {http://dx.plos.org/10.1371/journal.pone.0180284}, author = {Wei, X.-l. and Schmitt, I. and Hodkinson, B. and Flakus, A. and Kukwa, M. and Divakar, P.K. and Kirika, P.M. and Otte, J. and Meiser, A. and Lumbsch, H.T.}, editor = {Baruffini, E.} } @article {4454, title = {Using a temporal phylogenetic method to harmonize family- and genus-level classification in the largest clade of lichen-forming fungi}, journal = {Fungal Diversity}, volume = {84}, year = {2017}, pages = {101-117}, issn = {1560-2745}, doi = {10.1007/s13225-017-0379-z}, url = {http://link.springer.com/10.1007/s13225-017-0379-z}, author = {Divakar, P.K. and Crespo, A. and Kraichak, E. and Leavitt, S.D. and Singh, G. and Schmitt, I. and Lumbsch, H.T.} } @article {4453, title = {The cetrarioid core group revisited (Lecanorales: Parmeliaceae)}, journal = {Lichenologist}, volume = {43}, year = {2011}, pages = {537-551}, issn = {0024-2829}, doi = {10.1017/S0024282911000508}, url = {https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S0024282911000508}, author = {Nelsen, M.P. and Chavez, N. and Sackett-Hermann, E. and Thell, A. and Randlane, T. and Divakar, P.K. and Rico, V.J. and Lumbsch, H.T.} } @article {4372, title = {A DNA barcoding approach for identification of hidden diversity in Parmeliaceae (Ascomycota): Parmelia sensu stricto as a case study}, journal = {Botanical Journal of the Linnean Society}, volume = {180}, year = {2016}, pages = {21-29}, doi = {10.1111/boj.12358}, url = {https://academic.oup.com/botlinnean/article-lookup/doi/10.1111/boj.12358}, author = {Divakar, P.K. and Leavitt, S.D. and Molina, M. Carmen and Del-Prado, R. and Lumbsch, H.T. and Crespo, A.} } @article {4370, title = {Another example of cryptic diversity in lichen-forming fungi: the new species Parmelia mayi (Ascomycota: Parmeliaceae)}, journal = {Organisms Diversity \& Evolution}, volume = {11}, year = {2011}, pages = {331-342}, issn = {1439-6092}, doi = {10.1007/s13127-011-0060-4}, url = {http://link.springer.com/10.1007/s13127-011-0060-4}, author = {Molina, M. Carmen and Del-Prado, R. and Divakar, P.K. and S{\'a}nchez-Mata, D. and Crespo, A.} } @article {4349, title = {Conundrums in species concepts: the discovery of a new cryptic species segregated from Parmelina tiliacea (Ascomycota: Parmeliaceae)}, journal = {Lichenologist}, volume = {43}, year = {2011}, pages = {603-616}, issn = {0024-2829}, doi = {10.1017/S002428291100051X}, url = {https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S002428291100051X}, author = {N{\'u}{\~n}ez-Zapata, J. and Divakar, P.K. and del Prado, R. and Cubas, P. and Hawksworth, D.L. and Crespo, A.} } @article {3905, title = {Upper cortex anatomy corroborates phylogenetic hypothesis in species of Physconia (Ascomycota, Lecanoromycetes)}, journal = {Mycological Research}, volume = {111}, year = {2007}, pages = {1311-1320}, issn = {09537562}, doi = {10.1016/j.mycres.2007.08.009}, url = {http://linkinghub.elsevier.com/retrieve/pii/S0953756207001931}, author = {Divakar, P.K. and Amo de Paz, G. and del Prado, R. and Esslinger, T.L. and Crespo, A.} } @article {3867, title = {Towards a revised generic classification of lecanoroid lichens (Lecanoraceae, Ascomycota) based on molecular, morphological and chemical evidence}, journal = {Fungal Diversity}, volume = {78}, year = {2016}, pages = {293-304}, issn = {1560-2745}, doi = {10.1007/s13225-015-0354-5}, url = {http://link.springer.com/10.1007/s13225-015-0354-5}, author = {Zhao, X. and Leavitt, S.D. and Zhao, Z.T. and Zhang, L.L. and Arup, U. and Grube, M. and P{\'e}rez-Ortega, S. and Printzen, C. and {\'S}liwa, L. and Kraichak, E. and Divakar, P.K. and Crespo, A. and Lumbsch, H.T.} } @article {3446, title = {Molecular phylogenetic studies reveal an undescribed species within the North American concept of Melanelixia glabra (Parmeliaceae)}, journal = {Fungal Diversity}, volume = {42}, year = {2010}, pages = {47-55}, issn = {1560-2745}, doi = {10.1007/s13225-010-0027-3}, url = {http://link.springer.com/10.1007/s13225-010-0027-3}, author = {Divakar, P.K. and Figueras, G. and Hladun, N.L. and Crespo, A.} } @article {3384, title = {Testing morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene}, journal = {Molecular and Phylogenetic Evolution}, volume = {44}, year = {2007}, pages = {812-824}, abstract = {

Parmeliaceae is the largest family of lichen-forming fungi with more than 2000 species and includes taxa with different growth forms. Morphology was widely employed to distinguish groups within this large, cosmopolitan family. In this study we test these morphology-based groupings using DNA sequence data from three nuclear and one mitochondrial marker from 120 taxa that include 59 genera and represent the morphological and chemical diversity in this lineage. Parmeliaceae is strongly supported as monophyletic and six well-supported main clades can be distinguished within the family. The relationships among them remain unresolved. The clades largely agree with the morphology-based groupings and only the placement of four of the genera studied is rejected by molecular data, while four other genera belong to clades previously unrecognised. The classification of these previously misplaced genera, however, has already been questioned by some authors based on morphological evidence. These results support morphological characters as important for the identification of monophyletic clades within Parmeliaceae.

}, issn = {1055-7903}, doi = {10.1016/j.ympev.2006.11.029}, author = {Crespo, A. and Lumbsch, H.T. and Mattsson, J.-E. and Blanco, O. and Divakar, P.K. and Articus, K. and Wiklund, E. and Bawingan, P.A. and Wedin, M.} } @article {2689, title = {Testing morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene}, journal = {Molecular Phylogenetics and Evolution}, volume = {44}, year = {2007}, pages = {812-824}, issn = {10557903}, doi = {10.1016/j.ympev.2006.11.029}, url = {http://linkinghub.elsevier.com/retrieve/pii/S1055790306004854}, author = {Crespo, A. and Lumbsch, H.T. and Mattsson, J.-E. and Blanco, O. and Divakar, P.K. and Articus, K. and Wiklund, E. and Bawingan, P.A. and Wedin, M.} } @article {2479, title = {Testing the use of ITS rDNA and protein-coding genes in the generic and species delimitation of the lichen genus Usnea (Parmeliaceae, Ascomycota)}, journal = {Molecular Phylogenetics and Evolution}, volume = {68}, year = {2013}, pages = {357-372}, issn = {10557903}, doi = {10.1016/j.ympev.2013.04.005}, author = {Truong, C. and Divakar, P.K. and Yahr, R. and Crespo, A. and Clerc, P.} }