@article {5757,
	title = {Erg{\"a}nzungen zur Flechtenflora von Madeira mit besonderer Ber{\"u}cksichtigung lichenicoler Pilze},
	journal = {Herzogia},
	volume = {29},
	year = {2016},
	month = {Dec-01-2016},
	pages = {235-276},
	issn = {0018-0971},
	doi = {10.13158/heia.29.2.2016.235},
	url = {http://dx.doi.org/10.13158/heia.29.2.2016.235},
	author = {Berger, F. and Zimmermann, E.}
}
@article {5718,
	title = {Ruzenia spermoides},
	journal = {IMI Descriptions of Fungi and Bacteria},
	volume = {2090},
	year = {2016},
	pages = {6 pp.},
	url = {https://www.cabidigitallibrary.org/doi/abs/10.1079/DFB/20163393062},
	author = {Minter, D.W. and Cannon, P.F.}
}
@article {5545,
	title = {Byssoloma maderense is not endemic to Macaronesia},
	journal = {Evansia},
	volume = {33},
	year = {2016},
	pages = {54-62},
	doi = {https://doi.org/10.1639/0747-9859-33.2.54},
	author = {Breuss, O.}
}
@article {5517,
	title = {They seldom occur alone},
	journal = {Fungal Biology},
	volume = {120},
	year = {2016},
	pages = {1392-1415},
	issn = {1878-6146},
	doi = {10.1016/j.funbio.2016.05.009},
	url = {http://dx.doi.org/10.1016/j.funbio.2016.05.009},
	author = {Crous, P.W. and Groenewald, J.Z.}
}
@article {5483,
	title = {Hidden diversity of marine borderline lichens and a new order of fungi: Collemopsidiales (Dothideomyceta)},
	journal = {Fungal Diversity},
	volume = {80},
	year = {2016},
	pages = {285-300},
	issn = {1560-2745, 1878-9129},
	doi = {10.1007/s13225-016-0361-1},
	url = {http://dx.doi.org/10.1007/s13225-016-0361-1},
	author = {P{\'e}rez-Ortega, S. and Garrido-Benavent, I. and Grube, M. and Olmo, R. and De los R{\'\i}os, A.}
}
@article {5469,
	title = {Perzia triseptata gen. et sp. nov. (Ascomycota incertae sedis) from xeric coniferous bark in France and Montenegro},
	journal = {Mycologia Montenegrina},
	volume = {19},
	year = {2016},
	pages = {7-20},
	author = {Baral, H.-O. and Peri{\'c}, B.}
}
@article {5273,
	title = {Generic hyper-diversity in <I>Stachybotriaceae</I>},
	journal = {Persoonia},
	volume = {36},
	year = {2016},
	pages = {156-246},
	issn = {00315850},
	doi = {10.3767/003158516X691582},
	url = {http://openurl.ingenta.com/content/xref?genre=article\&issn=0031-5850\&volume=36\&issue=1\&spage=156},
	author = {Lombard, L. and Houbraken, J. and Decock, C. and Samson, R.A. and Meijer, M. and R{\'e}blov{\'a}, M. and Groenewald, J.Z. and Crous, P.W.}
}
@article {5219,
	title = {Fusicolla melogrammae},
	journal = {Persoonia},
	volume = {37},
	year = {2016},
	pages = {280-281},
	doi = {https://doi.org/10.3767/003158516X694499},
	author = {Lechat, C. and Aplin, N.}
}
@article {5202,
	title = {All that glitters is not Ramularia},
	journal = {Studies in Mycology},
	volume = {83},
	year = {2016},
	pages = {49-163},
	issn = {01660616},
	doi = {10.1016/j.simyco.2016.06.001},
	url = {https://linkinghub.elsevier.com/retrieve/pii/S016606161630001X},
	author = {Videira, S.I.R. and Groenewald, J.Z. and Braun, U. and Shin, H.D. and Crous, P.W.}
}
@article {5162,
	title = {Generic names in Magnaporthales},
	journal = {IMA Fungus},
	volume = {7},
	year = {2016},
	pages = {155-159},
	issn = {22106340},
	url = {https://imafungus.biomedcentral.com/articles/10.5598/imafungus.2016.07.01.09},
	author = {Zhang, N. and Luo, J. and Rossman, A.Y. and Aoki, T. and Chuma, I. and Crous, P.W. and Dean, R. and de Vries, R.P. and Donofrio, N. and Hyde, K.D. and Lebrun, M.-H. and Talbot, N.J. and Tharreau, D. and Tosa, Y. and Valent, B. and Wang, Z. and Xu, J.-R.}
}
@article {5081,
	title = {Asterodiscus and Stigmatodiscus, two new apothecial dothideomycete genera and the new order Stigmatodiscales},
	journal = {Fungal Diversity},
	volume = {80},
	year = {2016},
	pages = {271-284},
	issn = {1560-2745},
	doi = {10.1007/s13225-016-0356-y},
	url = {http://link.springer.com/10.1007/s13225-016-0356-y},
	author = {Voglmayr, H. and Gardiennet, A. and Jaklitsch, W.M.}
}
@article {5071,
	title = {Contribution to the phylogeny and taxonomy of the genus Taeniolella, with a focus on lichenicolous taxa},
	journal = {Fungal Biology},
	volume = {120},
	year = {2016},
	pages = {1416-1447},
	issn = {18786146},
	doi = {10.1016/j.funbio.2016.05.008},
	url = {https://linkinghub.elsevier.com/retrieve/pii/S1878614616300502},
	author = {Ertz, D. and Heuchert, B. and Braun, U. and Freebury, C.E. and Common, R.S. and Diederich, P.}
}
@article {4947,
	title = {Two new host-specific hepaticolous species of Catinaria (Ramalinaceae)},
	journal = {Lichenologist},
	volume = {48},
	year = {2016},
	pages = {441-449},
	issn = {0024-2829},
	doi = {10.1017/S0024282916000438},
	url = {https://www.cambridge.org/core/product/identifier/S0024282916000438},
	author = {Lendemer, J.C. and Buck, W.R. and Harris, R.C.}
}
@article {4752,
	title = {Calcarisporium cordycipiticola sp. nov., an important fungal pathogen of Cordyceps militaris},
	journal = {Phytotaxa},
	volume = {268},
	year = {2016},
	pages = {135-144},
	issn = {1179-3155},
	doi = {10.11646/phytotaxa.268.210.11646/phytotaxa.268.2.4},
	url = {http://biotaxa.org/Phytotaxa/issue/view/phytotaxa.268.2},
	author = {Sun, J.-Z. and Dong, C.-H. and Liu, X.-Z. and Liu, J.-K. and Hyde, K.D.}
}
@article {4655,
	title = {New species in Bryoria (Parmeliaceae, Lecanoromycetes) from north-west North America},
	journal = {Lichenologist},
	volume = {48},
	year = {2016},
	pages = {355-365},
	issn = {0024-2829},
	doi = {10.1017/S0024282916000268},
	url = {http://www.journals.cambridge.org/abstract_S0024282916000268},
	author = {Myllys, L. and Velmala, S. and Pino-Bodas, R. and Goward, T.}
}
@article {4635,
	title = {Macroevolution of specificity in cyanolichens of the genus Peltigera section Polydactylon (Lecanoromycetes, Ascomycota)},
	journal = {Systematic Biology},
	volume = {66},
	year = {2016},
	pages = {74-99},
	issn = {1063-5157},
	doi = {10.1093/sysbio/syw065},
	url = {https://academic.oup.com/sysbio/article-lookup/doi/10.1093/sysbio/syw065},
	author = {Magain, N. and Miadlikowska, J. and Goffinet, B. and S{\'e}rusiaux, E. and Lutzoni, F.}
}
@article {4622,
	title = {Phylogenetic reassessment of the Chaetomium globosum species complex},
	journal = {Persoonia},
	volume = {36},
	year = {2016},
	pages = {83-133},
	issn = {00315850},
	doi = {10.3767/003158516X689657},
	url = {http://openurl.ingenta.com/content/xref?genre=article\&issn=0031-5850\&volume=36\&issue=1\&spage=83},
	author = {Wang, X.W. and Lombard, L. and Groenewald, J.Z. and Li, J. and Videira, S.I.R. and Samson, R.A. and Liu, X.Z. and Crous, P.W.}
}
@article {4621,
	title = {Diversity and taxonomy of Chaetomium and Chaetomium-like fungi from indoor environments},
	journal = {Studies in Mycology},
	volume = {84},
	year = {2016},
	pages = {145-224},
	issn = {01660616},
	doi = {10.1016/j.simyco.2016.11.005},
	url = {http://linkinghub.elsevier.com/retrieve/pii/S0166061616300197},
	author = {Wang, X.W. and Houbraken, J. and Groenewald, J.Z. and Meijer, M. and Andersen, B. and Nielsen, K.F. and Crous, P.W. and Samson, R.A.}
}
@article {4546,
	title = {Megalaria allenae (Ramalinaceae), a new sorediate species from southeastern North America previously confused with M. pulverea},
	journal = {Bryologist},
	volume = {119},
	year = {2016},
	pages = {290-297},
	issn = {0007-2745},
	doi = {10.1639/0007-2745-119.3.290},
	url = {http://www.bioone.org/doi/10.1639/0007-2745-119.3.290},
	author = {McMullin, R.T. and Lendemer, J.C.}
}
@article {4535,
	title = {Type studies in the Rhizocarpon geographicum group (Rhizocarpaceae, lichenized Ascomycota)},
	journal = {Lichenologist},
	volume = {48},
	year = {2016},
	pages = {97-110},
	issn = {0024-2829},
	doi = {10.1017/S002428291500050X},
	url = {https://www.cambridge.org/core/services/aop-cambridge-core/content/view/S002428291500050X},
	author = {Roca-Valiente, B. and Hawksworth, D.L. and P{\'e}rez-Ortega, S. and Sancho, L.G. and Crespo, A.}
}
@article {4413,
	title = {New combinations of plant-associated fungi resulting from the change to one name for fungi},
	journal = {IMA Fungus},
	volume = {7},
	year = {2016},
	pages = {1-7},
	issn = {22106340},
	doi = {10.5598/imafungus.2016.07.01.01},
	url = {http://openurl.ingenta.com/content/xref?genre=article\&issn=2210-6340\&volume=7\&issue=1\&spage=1},
	author = {Rossman, A.Y. and Allen, W.C. and Castlebury, L.A.}
}
@article {4407,
	title = {Taxonomy and molecular phylogeny of Diatrypaceae (Ascomycota, Xylariales) species from the Brazilian semi-arid region, including four new species},
	journal = {Mycological Progress},
	volume = {15},
	year = {2016},
	pages = {15: 53},
	issn = {1617-416X},
	doi = {10.1007/s11557-016-1194-8},
	url = {http://link.springer.com/10.1007/s11557-016-1194-8},
	author = {de Almeida, D.A. Carneiro and Gusm{\~a}o, L.F. Pascholati and Miller, A.N.}
}
@article {4372,
	title = {A DNA barcoding approach for identification of hidden diversity in Parmeliaceae (Ascomycota): Parmelia sensu stricto as a case study},
	journal = {Botanical Journal of the Linnean Society},
	volume = {180},
	year = {2016},
	pages = {21-29},
	doi = {10.1111/boj.12358},
	url = {https://academic.oup.com/botlinnean/article-lookup/doi/10.1111/boj.12358},
	author = {Divakar, P.K. and Leavitt, S.D. and Molina, M. Carmen and Del-Prado, R. and Lumbsch, H.T. and Crespo, A.}
}
@article {4326,
	title = {Sharpening the species boundaries in the Cladonia mediterranea complex (Cladoniaceae, Ascomycota)},
	journal = {Persoonia},
	volume = {37},
	year = {2016},
	pages = {1-12},
	issn = {0031-5850},
	doi = {10.3767/003158516X688081},
	url = {http://www.ingentaconnect.com/content/10.3767/003158516X688081},
	author = {Pino-Bodas, R. and P{\'e}rez-Vargas, I. and Stenroos, S. and Ahti, T. and Burgaz, A.R.}
}
@article {4276,
	title = {Three new species in the Biatoropsis usnearum complex},
	journal = {Herzogia},
	volume = {29},
	year = {2016},
	pages = {337-354},
	issn = {0018-0971},
	doi = {10.13158/heia.29.2.2016.337},
	url = {http://www.bioone.org/doi/10.13158/heia.29.2.2016.337},
	author = {Millanes, A.M. and Diederich, P. and Westberg, M. and Wedin, M.}
}
@article {4261,
	title = {Arthonia parietinaria {\textendash} a common but frequently misunderstood lichenicolous fungus on species of the Xanthoria parietina-group},
	journal = {Fungal Biology},
	volume = {120},
	year = {2016},
	pages = {1341-1353},
	issn = {18786146},
	doi = {10.1016/j.funbio.2016.06.009},
	url = {http://linkinghub.elsevier.com/retrieve/pii/S1878614616300745},
	author = {Fleischhacker, A. and Grube, M. and Frisch, A. and Obermayer, W. and Hafellner, J.}
}
@article {4200,
	title = {Mniaecia jungermanniae (Helotiales), an overlooked bryophilous ascomycete in the Liberec Region (Czech Republic)},
	journal = {Czech Mycology},
	volume = {68},
	year = {2016},
	pages = {149-165},
	url = {www.czechmycology.org/_cmo/CM68204.pdf},
	author = {Egertov{\'a}, Z. and Gaisler, J. and Zemanov{\'a}, L. and Hrad{\'\i}lek, Z.}
}
@article {4126,
	title = {Collolechia revisited and a re-assessment of ascus characteristics in Placynthiaceae (Peltigerales, Ascomycota)Abstract},
	journal = {Lichenologist},
	volume = {48},
	year = {2016},
	pages = {3-12},
	issn = {0024-2829},
	doi = {10.1017/S0024282915000432},
	url = {http://www.journals.cambridge.org/abstract_S0024282915000432},
	author = {Ko{\v s}uthov{\'a}, Alica and Fern{\'a}ndez-Brime, S. and Westberg, M. and Wedin, M.}
}
@article {4107,
	title = {Coordinated ultrastructural and phylogenomic analyses shed light on the hidden phycobiont diversity of Trebouxia microalgae in Ramalina fraxinea},
	journal = {Molecular Phylogenetics and Evolution},
	volume = {94},
	year = {2016},
	pages = {765-777},
	issn = {10557903},
	doi = {10.1016/j.ympev.2015.10.021},
	url = {http://linkinghub.elsevier.com/retrieve/pii/S1055790315003243},
	author = {Catal{\'a}, S. and del Campo, E.M. and Barreno, E. and Garc{\'\i}a-Breijo, F.J. and Reig-Armi{\~n}ana, J. and Casano, L.M.}
}
@article {4009,
	title = {Phylogeny and morphology of the Peziza ammophila complex (Pezizales, Ascomycota), with description of two new species and a new form},
	journal = {Mycological Progress},
	volume = {15},
	year = {2016},
	pages = {883-901},
	issn = {1617-416X},
	doi = {10.1007/s11557-016-1213-9},
	url = {http://link.springer.com/10.1007/s11557-016-1213-9},
	author = {Vizzini, A. and Lantieri, A. and Medardi, G. and Ercole, E. and Cacialli, G.}
}
@article {3940,
	title = {Phylogeny, taxonomy and diversification events in the Caliciaceae},
	journal = {Fungal Diversity},
	year = {2016},
	issn = {1560-2745},
	doi = {10.1007/s13225-016-0372-y},
	url = {http://link.springer.com/10.1007/s13225-016-0372-y},
	author = {Prieto, M. and Wedin, M.}
}
@article {3927,
	title = {Hohenbuehelia bonii sp. nov. and H. culmicola: two pearls within the Marram Oyster},
	volume = {17},
	year = {2016},
	month = {2016/7//},
	pages = {78 - 86},
	isbn = {1468-1641},
	url = {http://www.sciencedirect.com/science/article/pii/S1468164116300214},
	author = {Ainsworth, A. Martyn and Suz, Laura M. and Dentinger, Bryn T.M.}
}
@article {3917,
	title = {A Key to the Mycena of Norway},
	year = {2016},
	url = {http://www.mycena.no/},
	author = {Arne Aronsen}
}
@article {3900,
	title = {Xylaria cinerea and X. crozonensis: two distinctive additions to the British mycota},
	journal = {Field Mycology},
	volume = {17},
	year = {2016},
	pages = {7-11},
	doi = {doi:10.1016/j.fl dmyc.2016.01.005},
	author = {Henrici, A.}
}
@article {3868,
	title = {Lecidella elaeochroma (Ach.) M. Choisy as a chameleon species},
	journal = {British Lichen Society Bulletin},
	volume = {118},
	year = {2016},
	pages = {2-5},
	author = {Spier, L.}
}
@article {3867,
	title = {Towards a revised generic classification of lecanoroid lichens (Lecanoraceae, Ascomycota) based on molecular, morphological and chemical evidence},
	journal = {Fungal Diversity},
	volume = {78},
	year = {2016},
	pages = {293-304},
	issn = {1560-2745},
	doi = {10.1007/s13225-015-0354-5},
	url = {http://link.springer.com/10.1007/s13225-015-0354-5},
	author = {Zhao, X. and Leavitt, S.D. and Zhao, Z.T. and Zhang, L.L. and Arup, U. and Grube, M. and P{\'e}rez-Ortega, S. and Printzen, C. and {\'S}liwa, L. and Kraichak, E. and Divakar, P.K. and Crespo, A. and Lumbsch, H.T.}
}
@article {3864,
	title = {Evidence for the polyphyly of Encoelia and Encoelioideae with reconsideration of respective families in Leotiomycetes},
	journal = {Fungal Diversity},
	year = {2016},
	issn = {1560-2745},
	doi = {10.1007/s13225-016-0370-0},
	url = {http://link.springer.com/10.1007/s13225-016-0370-0},
	author = {P{\"a}rtel, K. and Baral, H.-O. and Tamm, H. and P{\~o}ldmaa, K.}
}
@article {3861,
	title = {Growth and development of ascomata in two members of the British Graphidaceae (lichenized Ascomycota; Ostropales)},
	journal = {Lichenologist},
	volume = {48},
	year = {2016},
	pages = {249-254},
	issn = {0024-2829},
	doi = {10.1017/S0024282916000098},
	url = {http://www.journals.cambridge.org/abstract_S0024282916000098},
	author = {Pentecost, A.}
}
@article {3860,
	title = {Seven species of Graphis from Portugal reported new to Europe},
	journal = {Lichenologist},
	volume = {48},
	year = {2016},
	pages = {259-267},
	issn = {0024-2829},
	doi = {10.1017/S0024282916000153},
	url = {http://www.journals.cambridge.org/abstract_S0024282916000153},
	author = {Lepista, Z. and Aptroot, A.}
}
@article {3859,
	title = {Microchemical and molecular investigations reveal Pseudephebe species as cryptic with an environmentally modified morphology},
	journal = {Lichenologist},
	volume = {48},
	year = {2016},
	pages = {527-543},
	issn = {0024-2829},
	doi = {10.1017/S0024282916000426},
	url = {http://www.journals.cambridge.org/abstract_S0024282916000426},
	author = {Boluda, C.G. and Hawksworth, D.L. and Divarkar, P.K. and Crespo, A. and Rico, V.J.}
}
@article {3858,
	title = {New and overlooked species from the Galapagos Islands: the generic concept of Diploicia reassessed},
	journal = {Lichenologist},
	volume = {48},
	year = {2016},
	pages = {489-515},
	issn = {0024-2829},
	doi = {10.1017/S0024282916000244},
	url = {http://www.journals.cambridge.org/abstract_S0024282916000244},
	author = {Bungartz, F. and Elix, J.A. and Kalb, K. and Giralt, M.}
}
@article {3857,
	title = {Morphological, chemical and species delimitation analyses provide new taxonomic insights into two groups of Rinodina},
	journal = {The Lichenologist},
	volume = {48},
	year = {2016},
	pages = {469-488},
	issn = {0024-2829},
	doi = {10.1017/S0024282916000359},
	url = {http://www.journals.cambridge.org/abstract_S0024282916000359},
	author = {RESL, P. and Mayrhofer, H. and CLAYDEN, S.R. and Spribille, T. and Thor, G. and T{\o}nsberg, T. and SHEARD, J.W.}
}
@article {3817,
	title = {Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota).},
	journal = {Molecular and Phylogenetic Evolution},
	volume = {98},
	year = {2016},
	pages = {210-232},
	abstract = {<p>The Xylariaceae (Sordariomycetes) comprise one of the largest and most diverse families of Ascomycota, with at least 85 accepted genera and ca. 1343 accepted species. In addition to their frequent occurrence as saprotrophs, members of the family often are found as endophytes in living tissues of phylogenetically diverse plants and lichens. Many of these endophytes remain sterile in culture, precluding identification based on morphological characters. Previous studies indicate that endophytes are highly diverse and represent many xylariaceous genera; however, phylogenetic analyses at the family level generally have not included endophytes, such that their contributions to understanding phylogenetic relationships of Xylariaceae are not well known. Here we use a multi-locus, cumulative supermatrix approach to integrate 92 putative species of fungi isolated from plants and lichens into a phylogenetic framework for Xylariaceae. Our collection spans 1933 isolates from living and senescent tissues in five biomes across the continental United States, and here is analyzed in the context of previously published sequence data from described species and additional taxon sampling of type specimens from culture collections. We found that the majority of strains obtained in our surveys can be classified in the hypoxyloid and xylaroid subfamilies, although many also were found outside of these lineages (as currently circumscribed). Many endophytes were placed in lineages previously not known for endophytism. Most endophytes appear to represent novel species, but inferences are limited by potential gaps in public databases. By linking our data, publicly available sequence data, and records of ascomata, we identify many geographically widespread, host-generalist clades capable of symbiotic associations with diverse photosynthetic partners. Concomitant with such cosmopolitan host use and distributions, many xylariaceous endophytes appear to inhabit both living and non-living plant tissues, with potentially important roles as saprotrophs. Overall, our study reveals major gaps in the availability of multi-locus datasets and metadata for this iconic family, and provides new hypotheses regarding the ecology and evolution of endophytism and other trophic modes across the family Xylariaceae.</p>
},
	issn = {1095-9513},
	doi = {10.1016/j.ympev.2016.02.010},
	author = {U{\textquoteright}Ren, J.M. and Miadlikowska, J. and Zimmerman, N.B. and Lutzoni, F. and Stajich, J.E. and Arnold, A.E.}
}
@article {3350,
	title = {Resolution of morphology-based taxonomic delusions: Acrocordiella, Basiseptospora, Blogiascospora, Clypeosphaeria, Hymenopleella, Lepteutypa, Pseudapiospora, Requienella, Seiridium and Strickeria},
	journal = {Persoonia},
	volume = {32},
	year = {2016},
	pages = {82-105},
	doi = {http://dx.doi.org/10.3767/003158516X690475},
	url = {http://www.ingentaconnect.com/content/nhn/pimj/pre-prints/content-nbc_persoonia_0342},
	author = {Jaklitsch, W.M. and Gardiennet, A. and Voglmayr, H.}
}
