Literature

AuthorsYearTitlesort descending
R. Lücking, del Prado, R., Lumbsch, H. T., Will‐Wolf, S., Aptroot, A., Sipman, H. J. M., Umaña, L., Chaves, J. L.2008Phylogenetic patterns of morphological and chemical characters and reproductive mode in the Heterodermia obscurata group in Costa Rica (Ascomycota, Physciaceae)
L. C. Mejía, Castlebury, L. A., Rossman, A. Y., Sogonov, M. V., White, J. F.2008Phylogenetic placement and taxonomic review of the genus Cryptosporella and its synonyms Ophiovalsa and Winterella (Gnomoniaceae, Diaporthales)
V. Hustad, Miller A. N.2011Phylogenetic placement of four genera within the Leotiomycetes (Ascomycota)
J. D. Lawrey, Diederich, P., Nelsen, M. P., Freebury, C., van den Broeck, D., Sikaroodi, M., Ertz, D.2012Phylogenetic placement of lichenicolous Phoma species in the Phaeosphaeriaceae (Pleosporales, Dothideomycetes)
L. Muggia, Gueidan, C., Grube, M.2010Phylogenetic placement of some morphologically unusual members of Verrucariales
L. Muggia, Kopun, T., Ertz, D.2015Phylogenetic placement of the lichenicolous, anamorphic genus Lichenodiplis and its connection to Muellerella-like teleomorphs
R. Pino-Bodas, Zhurbenko, M. P., Stenroos, S.2017Phylogenetic placement within Lecanoromycetes of lichenicolous fungi associated with Cladonia and some other genera
J. Miadlikowska, Richardson, D., Magain, N., Ball, B., Anderson, F., Cameron, R., Lendemer, J., Truong, C., Lutzoni, F.2014Phylogenetic placement, species delimitation, and cyanobiont identity of endangered aquatic Peltigera species (lichen-forming Ascomycota, Lecanoromycetes)
X. W. Wang, Bai, F. Y., Bensch, K., Meijer, M., Sun, B. D., Han, Y. F., Crous, P. W., Samson, R. A., Yang, F. Y., Houbraken, J.2019Phylogenetic re-evaluation of Thielavia with the introduction of a new family Podosporaceae
J. - G. Han, Hosoya, T., Sung, G. - H., Shin, H. - D.2014Phylogenetic reassessment of Hyaloscyphaceae sensu lato (Helotiales, Leotiomycetes) based on multigene analyses
X. W. Wang, Lombard, L., Groenewald, J. Z., Li, J., Videira, S. I. R., Samson, R. A., Liu, X. Z., Crous, P. W.2016Phylogenetic reassessment of the Chaetomium globosum species complex
L. Saag, Tõrra, T., Saag, A., Del-Prado, R., Randlane, T.2011Phylogenetic relations of European shrubby taxa of the genus Usnea
Å. Kruys, Wedin M.2009Phylogenetic relationships and an assessment of traditionally used taxonomic characters in the Sporormiaceae (Pleosporales, Dothideomycetes, Ascomycota), utilising multi‐gene phylogenies
C. K. M. Tsui, Berbee M. L.2006Phylogenetic relationships and convergence of helicosporous fungi inferred from ribosomal DNA sequences
C. K. M. Tsui, Berbee M. L.2006Phylogenetic relationships and convergence of helicosporous fungi inferred from ribosomal DNA sequences.
delCarmen M. Molina, Crespo, A., Blanco, O., Lumbsch, H. T., Hawksworth, D. L.2004Phylogenetic relationships and species concepts in Parmelia s. str. (Parmeliaceae) inferred from nuclear ITS rDNA and beta-tubulin sequences
Å. Kruys, Eriksson, O. E., Wedin, M.2006Phylogenetic relationships of coprophilous Pleosporales (Dothideomycetes, Ascomycota), and the classification of some bitunicate taxa of unknown position
W. M. Jaklitsch, Voglmayr H.2012Phylogenetic relationships of five genera of Xylariales and Rosasphaeria gen. nov. (Hypocreales)
A. N. Miller, Huhndorf, S. M., Fournier, J.2014Phylogenetic relationships of five uncommon species of Lasiosphaeria and three new species in the Helminthosphaeriaceae (Sordariomycetes)
L. A. Castlebury, Rossman, A. Y., Hyten, A. S.2006Phylogenetic relationships of Neonectria/Cylindrocarpon on Fagus in North America
G. Helms, Friedl, T., Rambold, G.2003Phylogenetic relationships of the Physciaceae inferred from rDNA sequence data and selected phenotypic characters
Y. - M. Liang, Kakishima, M., Tian, C. - M.2006Phylogenetic relationships on 14 morphologically similar species of Pucciniastrum in Japan based on rDNA sequence data
J. Miadlikowska, Lutzoni F.2000Phylogenetic revision of the genus Peltigera (lichen-forming Ascomycota) based on morphological, chemical, and large subunit nuclear ribosomal DNA data
A. Vialle, Feau, N., Frey, P., Bernier, L., Hamelin, R. C.2013Phylogenetic species recognition reveals host-specific lineages among poplar rust fungi
H. - M. Hsieh, Lin, C. - R., Fang, M. - J., Rogers, J. D., Fournier, J., Lechat, C., Ju, Y. - M.2010Phylogenetic status of Xylaria subgenus Pseudoxylaria among taxa of the subfamily Xylarioideae (Xylariaceae) and phylogeny of the taxa involved in the subfamily
M. Westberg, Arup, U., Kärnefelt, I.2007Phylogenetic studies in the Candelariaceae (lichenized Ascomycota) based on nuclear ITS DNA sequence data
M. Prieto, Martínez, I., Aragón, G., Otálora, M. A. G., Lutzoni, F.2010Phylogenetic study of Catapyrenium s. str. (Verrucariaceae, lichen-forming Ascomycota) and related genus Placidiopsis
S. Fernández-Brime, Llimona, X., Lutzoni, F., Gaya, E.2013Phylogenetic study of Diploschistes (lichen-forming Ascomycota: Ostropales: Graphidaceae), based on morphological, chemical, and molecular data
J. Sánchez-Ballesteros, González, V., Salazar, O., Acero, J., Portal, M. A., Julián, M., Rubio, V., Bills, G. F., Polishook, J. D., Platas, G., Mochales, S., Peláez, F.2000Phylogenetic study of Hypoxylon and related genera based on ribosomal ITS sequences
A. M. C. Tang, Jeewon, R., Hyde, K. D.2007Phylogenetic utility of protein (RPB2, b-tubulin) and ribosomal (LSU, SSU) gene sequences in the systematics of Sordariomycetes (Ascomycota, Fungi)
K. Hansen, Laessoe, T., Pfister, D. H.2001Phylogenetics of the Pezizaceae, with an emphasis on Peziza
J. Luo, Qiu, H., Cai, G., Wagner, N. E., Bhattacharya, D., Zhang, N.2015Phylogenomic analysis uncovers the evolutionary history of nutrition and infection mode in rice blast fungus and other Magnaporthales
A. M. Millanes, Diederich, P., Ekman, S., Wedin, M.2011Phylogeny and character evolution in the jelly fungi (Tremellomycetes, Basidiomycota, Fungi)
E. Baloch, Gilenstam, G., Wedin, M.2009Phylogeny and classification of Cryptodiscus, with a taxonomic synopsis of the Swedish species
K. M. Thambugala, Camporesi, E., Ariyawansa, H. A., Phookamsak, R., Liu, Z. - Y., Hyde, K. D.2014Phylogeny and morphology of Phaeosphaeriopsis triseptata sp. nov., and Phaeosphaeriopsis glaucopunctata
A. Vizzini, Lantieri, A., Medardi, G., Ercole, E., Cacialli, G.2016Phylogeny and morphology of the Peziza ammophila complex (Pezizales, Ascomycota), with description of two new species and a new form
C. Salgado-Salazar, Rossman, A. Y., Samuels, G. J., Hirooka, Y., Sanchez, R. M., Chaverri, P.2015Phylogeny and taxonomic revision of Thelonectria discophora (Ascomycota, Hypocreales, Nectriaceae) species complex
A. Nordin, Savic, S., Tibell, L.2010Phylogeny and taxonomy of Aspicilia and Megasporaceae
M. Réblová, Nekvindová, J., Miller, A. N.2021Phylogeny and taxonomy of Catenularia and similar fungi with catenate conidia
P. W. Crous, Braun, U., Wingfield, M. J., Wood, A. R., Shin, H. D., Summerell, B. A., Alfenas, A. C., Cumagun, C. J. R., Groenewald, J. Z.2009Phylogeny and taxonomy of obscure genera of microfungi
Q. - T. Wang, Guo, M. - J., Lv, T., Zhou, H., Wang, S., Wang, S. - J., Lin, Y. - R., Gronefeld, S., Kirschner, R., Piepenbring, M., Hofmann, T. A., Cannon, P. F., Hou, C. - L.2023Phylogeny and taxonomy of Rhytisma-like species worldwide
L. Myllys, Stenroos, S., Thell, A., Ahti, T.2003Phylogeny of bipolar Cladonia arbuscula and Cladonia mitis (Lecanorales, Euascomycetes)
M. Réblová, Winka K.2000Phylogeny of Chaetosphaeria and its anamorphs based on morphological and molecular data
K. Tanaka, Endo, M., Hirayama, K., Okane, I., Hosoya, T., Sato, T.2011Phylogeny of Discosia and Seimatosporium, and introduction of Adisciso and Immersidiscosia genera nova
E. C. A. Abeln, de Pagter, M. A., Verkley, G. J. M.2000Phylogeny of Pezicula, Dermea and Neofabraea inferred from partial sequences of the nuclear ribosomal RNA gene cluster
M. Westberg, Millanes, A. M., Knudsen, K., Wedin, M.2015Phylogeny of the Acarosporaceae (Lecanoromycetes, Ascomycota, Fungi) and the evolution of carbonized ascomata
L. Myllys, Velmala, S., Holien, H., Halonen, P., Wang, L. -s., Goward, T.2011Phylogeny of the genus Bryoria
S. Stenroos, Hyvönen, J., Myllys, L., Thell, A., Ahti, T.2002Phylogeny of the genus Cladonia s. lat. (Cladoniaceae, Ascomycetes) inferred from molecular, morphological, and chemical data
S. Stenroos, Hyvönen, J., Myllys, L., Thell, A., Ahti, T.2002Phylogeny of the genus Cladonia s.lat. (Cladoniaceae, Ascomycetes) inferred from molecular, morphological, and chemical data
B. Moncada, Lücking, R., Betancourt-Macuase, L.2013Phylogeny of the Lobariaceae (lichenized Ascomycota: Peltigerales), with a reappraisal of the genus Lobariella

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Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith