Literature

AuthorsYearTitlesort ascending
J. Miadlikowska, Lutzoni F.2000Phylogenetic revision of the genus Peltigera (lichen-forming Ascomycota) based on morphological, chemical, and large subunit nuclear ribosomal DNA data
Y. - M. Liang, Kakishima, M., Tian, C. - M.2006Phylogenetic relationships on 14 morphologically similar species of Pucciniastrum in Japan based on rDNA sequence data
G. Helms, Friedl, T., Rambold, G.2003Phylogenetic relationships of the Physciaceae inferred from rDNA sequence data and selected phenotypic characters
L. A. Castlebury, Rossman, A. Y., Hyten, A. S.2006Phylogenetic relationships of Neonectria/Cylindrocarpon on Fagus in North America
A. N. Miller, Huhndorf, S. M., Fournier, J.2014Phylogenetic relationships of five uncommon species of Lasiosphaeria and three new species in the Helminthosphaeriaceae (Sordariomycetes)
W. M. Jaklitsch, Voglmayr H.2012Phylogenetic relationships of five genera of Xylariales and Rosasphaeria gen. nov. (Hypocreales)
Å. Kruys, Eriksson, O. E., Wedin, M.2006Phylogenetic relationships of coprophilous Pleosporales (Dothideomycetes, Ascomycota), and the classification of some bitunicate taxa of unknown position
delCarmen M. Molina, Crespo, A., Blanco, O., Lumbsch, H. T., Hawksworth, D. L.2004Phylogenetic relationships and species concepts in Parmelia s. str. (Parmeliaceae) inferred from nuclear ITS rDNA and beta-tubulin sequences
C. K. M. Tsui, Berbee M. L.2006Phylogenetic relationships and convergence of helicosporous fungi inferred from ribosomal DNA sequences.
C. K. M. Tsui, Berbee M. L.2006Phylogenetic relationships and convergence of helicosporous fungi inferred from ribosomal DNA sequences
Å. Kruys, Wedin M.2009Phylogenetic relationships and an assessment of traditionally used taxonomic characters in the Sporormiaceae (Pleosporales, Dothideomycetes, Ascomycota), utilising multi‐gene phylogenies
L. Saag, Tõrra, T., Saag, A., Del-Prado, R., Randlane, T.2011Phylogenetic relations of European shrubby taxa of the genus Usnea
X. W. Wang, Lombard, L., Groenewald, J. Z., Li, J., Videira, S. I. R., Samson, R. A., Liu, X. Z., Crous, P. W.2016Phylogenetic reassessment of the Chaetomium globosum species complex
J. - G. Han, Hosoya, T., Sung, G. - H., Shin, H. - D.2014Phylogenetic reassessment of Hyaloscyphaceae sensu lato (Helotiales, Leotiomycetes) based on multigene analyses
X. W. Wang, Bai, F. Y., Bensch, K., Meijer, M., Sun, B. D., Han, Y. F., Crous, P. W., Samson, R. A., Yang, F. Y., Houbraken, J.2019Phylogenetic re-evaluation of Thielavia with the introduction of a new family Podosporaceae
J. Miadlikowska, Richardson, D., Magain, N., Ball, B., Anderson, F., Cameron, R., Lendemer, J., Truong, C., Lutzoni, F.2014Phylogenetic placement, species delimitation, and cyanobiont identity of endangered aquatic Peltigera species (lichen-forming Ascomycota, Lecanoromycetes)
R. Pino-Bodas, Zhurbenko, M. P., Stenroos, S.2017Phylogenetic placement within Lecanoromycetes of lichenicolous fungi associated with Cladonia and some other genera
L. Muggia, Kopun, T., Ertz, D.2015Phylogenetic placement of the lichenicolous, anamorphic genus Lichenodiplis and its connection to Muellerella-like teleomorphs
L. Muggia, Gueidan, C., Grube, M.2010Phylogenetic placement of some morphologically unusual members of Verrucariales
J. D. Lawrey, Diederich, P., Nelsen, M. P., Freebury, C., van den Broeck, D., Sikaroodi, M., Ertz, D.2012Phylogenetic placement of lichenicolous Phoma species in the Phaeosphaeriaceae (Pleosporales, Dothideomycetes)
V. Hustad, Miller A. N.2011Phylogenetic placement of four genera within the Leotiomycetes (Ascomycota)
L. C. Mejía, Castlebury, L. A., Rossman, A. Y., Sogonov, M. V., White, J. F.2008Phylogenetic placement and taxonomic review of the genus Cryptosporella and its synonyms Ophiovalsa and Winterella (Gnomoniaceae, Diaporthales)
R. Lücking, del Prado, R., Lumbsch, H. T., Will‐Wolf, S., Aptroot, A., Sipman, H. J. M., Umaña, L., Chaves, J. L.2008Phylogenetic patterns of morphological and chemical characters and reproductive mode in the Heterodermia obscurata group in Costa Rica (Ascomycota, Physciaceae)
K. Hansen, Perry, B. A., Pfister, D. H.2005Phylogenetic origins of two cleistothecial fungi, Orbicula parietina and Lasiobolidium orbiculoides, within the operculate discomycetes
B. Slippers, Boissin, E., Phillips, A. J. L., Groenewald, J. Z., Lombard, L., Wingfield, M. J., Postma, A., Burgess, T., Crous, P. W.2013Phylogenetic lineages in the Botryosphaeriales: a systematic and evolutionary framework
D. Ertz, Diederich, P., Lawrey, J. D., Berger, F., Freebury, C. E., Coppins, B., Gardiennet, A., Hafellner, J.2015Phylogenetic insights resolve Dacampiaceae (Pleosporales) as polyphyletic: Didymocyrtis (Pleosporales, Phaeosphaeriaceae) with Phoma-like anamorphs resurrected and segregated from Polycoccum (Trypetheliales, Polycoccaceae fam. nov.)
B. Goffinet, Miadlikowska, J., Goward, T.2003Phylogenetic inferences based on nrDNA sequences support five morphospecies within the Peltigera didactyla complex (lichenized Ascomycota)
A. Crespo, Kauff, F., Divakar, P. K., del Prado, R., Pérez-Ortega, S., Amo de Paz, G., Ferencova, Z., Blanco, O., Roca-Valiente, B., Núñez-Zapata, J., Cubas, P., Argüello, A., Elix, J. A., Esslinger, T. L., Hawksworth, D. L., Millanes, A. M., M. Molina, C., Wedin, M., Ahti, T., Aptroot, A., Barreno, E., Bungartz, F., Calvelo, S., Candan, M., Cole, M., Ertz, D., Goffinet, B., Lindblom, L., Lücking, R., Lutzoni, F., Mattsson, J. - E., Messuti, M. I., Miadlikowska, J., Piercey-Normore, M. D., Rico, V. J., Sipman, H. J. M., Schmitt, I., Spribille, T., Thell, A., Thor, G., Upreti, D., Lumbsch, H. T.2010Phylogenetic generic classification of parmelioid lichens (Parmeliaceae, Ascomycota) based on molecular, morphological and chemical evidence
J. D. Lawrey, Binder, M., Diederich, P., Molina, M. C., Sikaroodi, M., Ertz, D.2007Phylogenetic diversity of lichen-associated homobasidiomycetes
K. Hansen, Læssøe, T., Pfister, D. H.2002Phylogenetic diversity in the core group of Peziza inferred from ITS sequences and morphology
G. - H. Sung, Hywel-Jones, N. L., Sung, J. - M., Luangsa-Ard, J. J., Shrestha, B., Spatafora, J. W.2007Phylogenetic classification of Cordyceps and the clavicipitaceous fungi
S. Parnmen, Lücking, R., Lumbsch, H. T.2012Phylogenetic classification at generic level in the absence of distinct phylogenetic patterns of phenotypical variation: a case study in Graphidaceae (Ascomycota)
M. Réblová, Miller, A. N., Réblová, K., Stepánek, V.2018Phylogenetic classification and generic delineation of Calyptosphaeria gen. nov., Lentomitella, Spadicoides and Torrentispora (Sordariomycetes)
W. M. Jaklitsch, Fournier, J., Rogers, J. D., Voglmayr, H.2014Phylogenetic and taxonomic revision of <I>Lopadostoma</I>
Y. Zhang, Fournier, J., Crous, P. W., Pointing, S. B., Hyde, K. D.2009Phylogenetic and morphological assessment of two new species of Amniculicola and their allies (Pleosporales)
M. D. Piercey-Normore, Ahti, T., Goward, T.2010Phylogenetic and haplotype analyses of four segregates within Cladonia arbuscula s.l.
N. V. Ivanova, Depriest, P. T., Bobrova, V. K., Troitsky, A. V.1999Phylogenetic analysis of the lichen family Umbilicariaceae based on nuclear ITS1 and ITS2 rDNA Sequences
K. O’Donnell, Rooney, A. P., Proctor, R. H., Brown, D. W., McCormick, S. P., Ward, T. J., Frandsen, R. J. N., Lysøe, E., Rehner, S. A., Aoki, T., Robert, V. A. R. G., Crous, P. W., Groenewald, J. Z., Kang, S., Geiser, D. M.2013Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria
M. Schmull, Miadlikowska, J., Pelzer, M., Stocker-Worgotter, E., Hofstetter, V., Fraker, E., Hodkinson, B. P., Reeb, V., Kukwa, M., Lumbsch, H. T., Kauff, F., Lutzoni, F.2011Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota)
F. Rose, Purvis, O. W., Coppins, B. J.2009Phyllopsora
E. Sérusiaux, Coppins, B. J., Lücking, R.2007Phylloblastia inexpectata (Verrucariaceae), a new species of foliicolous lichen from Western Europe and Madeira
G. F. Laundon, Rainbow A. F.1969Phragmidium bulbosum
K. M. Fontaine, Beck, A., Stocker-Worgotter, E., Piercey-Normore, M. D.2012Photobiont Relationships and Phylogenetic History of Dermatocarpon luridum var. luridum and Related Dermatocarpon Species
L. Tibell2001Photobiont association and molecular phylogeny of the lichen genus Chaenotheca
P. F. Cannon, Minter D. W.2017Phomatospora arenaria
E. Punithalingam, Tulloch, M., Leach, C. M.1972Phoma epicoccina sp.nov. on Dactylis glomerata
B. Benfield, James, P. W., Hitch, C. J. B.2009Phlyctis
A. Leuchtmann, Newell S. Y.1991Phaeosphaeria spartinicola, a new species on Spartina
E. Punithalingam, Spooner B. M.1997Phaeoseptoria peltigerae sp. nov. associated with the lichen Peltigera horizontalis
B. Edwards, Coppins B. J.2009Phaeophyscia

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Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith