01630nas a2200601 4500008004100000245014500041210006900186300001400255490000700269100001500276700001400291700001800305700001800323700002200341700001800363700001800381700001500399700002200414700002300436700001400459700001800473700001400491700001900505700002000524700001900544700001900563700001300582700001200595700001500607700001600622700001600638700001600654700001500670700001300685700001300698700001700711700001700728700001600745700001600761700002000777700001800797700002100815700002600836700001500862700001800877700001600895700001700911700001400928700001300942700001500955700001700970856004100987 2010 eng d00aPhylogenetic generic classification of parmelioid lichens (Parmeliaceae, Ascomycota) based on molecular, morphological and chemical evidence0 aPhylogenetic generic classification of parmelioid lichens Parmel a1735-17530 v591 aCrespo, A.1 aKauff, F.1 aDivakar, P.K.1 adel Prado, R.1 aPérez-Ortega, S.1 aAmo de Paz, G1 aFerencova, Z.1 aBlanco, O.1 aRoca-Valiente, B.1 aNúñez-Zapata, J.1 aCubas, P.1 aArgüello, A.1 aElix, J A1 aEsslinger, T L1 aHawksworth, D L1 aMillanes, A.M.1 aMolina, Carmen1 aWedin, M1 aAhti, T1 aAptroot, A1 aBarreno, E.1 aBungartz, F1 aCalvelo, S.1 aCandan, M.1 aCole, M.1 aErtz, D.1 aGoffinet, B.1 aLindblom, L.1 aLücking, R1 aLutzoni, F.1 aMattsson, J.-E.1 aMessuti, M.I.1 aMiadlikowska, J.1 aPiercey-Normore, M.D.1 aRico, V.J.1 aSipman, H J M1 aSchmitt, I.1 aSpribille, T1 aThell, A.1 aThor, G.1 aUpreti, D.1 aLumbsch, H T uhttp://www.jstor.org/stable/4105987000610nas a2200157 4500008004100000022001400041245016300055210006900218300001100287490000700298100001800305700001900323700001800342700001700360856007500377 2012 eng d a1471-214800aMiocene and Pliocene dominated diversification of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota) and Pleistocene population expansions0 aMiocene and Pliocene dominated diversification of the lichenform a18 pp.0 v121 aLeavitt, S.D.1 aEsslinger, T L1 aDivakar, P.K.1 aLumbsch, H T uhttp://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2148-12-17600688nas a2200217 4500008004100000022001300041245012000054210006900174300001200243490000800255100001400263700001800277700001900295700001300314700001600327700001300343700001500356700001700371700001600388856006600404 2013 eng d a1878614600aThe sister-group relationships of the largest family of lichenized fungi, Parmeliaceae (Lecanorales, Ascomycota)0 asistergroup relationships of the largest family of lichenized fu a715-7210 v1171 aSingh, G.1 aDivakar, P.K.1 aDal Grande, F.1 aOtte, J.1 aParnmen, S.1 aWedin, M1 aCrespo, A.1 aLumbsch, H T1 aSchmitt, I. uhttp://linkinghub.elsevier.com/retrieve/pii/S187861461300117700669nas a2200193 4500008004100000022001400041245016700055210006900222300001400291490000700305100001800312700001800330700001700348700001300365700001900378700001800397700001500415856004500430 2012 eng d a0002-912200aDiversification of the newly recognized lichen-forming fungal lineage Montanelia (Parmeliaceae, Ascomycota) and its relation to key geological and climatic events0 aDiversification of the newly recognized lichenforming fungal lin a2014-20260 v991 aDivakar, P.K.1 aDel-Prado, R.1 aLumbsch, H T1 aWedin, M1 aEsslinger, T L1 aLeavitt, S.D.1 aCrespo, A. uhttp://doi.wiley.com/10.3732/ajb.120025800627nas a2200169 4500008004100000022001400041245016400055210006900219300001200288490000700300100001700307700001500324700001500339700001800354700002000372856006500392 2015 eng d a0024-282900aMolecular sequence data from populations of Bryoria fuscescens s. lat. in the mountains of central Spain indicates a mismatch between haplotypes and chemotypes0 aMolecular sequence data from populations of Bryoria fuscescens s a279-2860 v471 aBoluda, C.G.1 aRico, V.J.1 aCrespo, A.1 aDivakar, P.K.1 aHawksworth, D L uhttp://www.journals.cambridge.org/abstract_S002428291500027400834nas a2200253 4500008004100000245017100041210006900212300001300281490000700294100001400301700001900315700001800334700001300352700001800365700002000383700001500403700001500418700001500433700002900448700001700477700001600494700001800510856005200528 2015 eng d00aCoalescent-based species delimitation approach uncovers high cryptic diversity in the cosmopolitan lichen-forming fungal genus Protoparmelia (Lecanorales, Ascomycota)0 aCoalescentbased species delimitation approach uncovers high cryp ae01246250 v101 aSingh, G.1 aDal Grande, F.1 aDivakar, P.K.1 aOtte, J.1 aLeavitt, S.D.1 aSzczepanska, K.1 aCrespo, A.1 aRico, V.J.1 aAptroot, A1 aCáceres, M.E., da Silva1 aLumbsch, H T1 aSchmitt, I.1 aFontaneto, D. uhttp://dx.plos.org/10.1371/journal.pone.012462500615nas a2200169 4500008004100000022001400041245012300055210006900178300001200247490000700259100001500266700001800281700001800299700001400317700002000331856009400351 1999 eng d a0024-282900aMolecular studies on Punctelia species of the Iberian Peninsula, with an emphasis on specimens newly colonizing Madrid0 aMolecular studies on Punctelia species of the Iberian Peninsula a299-3080 v361 aCrespo, A.1 aDivakar, P.K.1 aArgüello, A.1 aGasca, C.1 aHawksworth, D L uhttps://www.cambridge.org/core/services/aop-cambridge-core/content/view/S002428290401443400678nas a2200205 4500008004100000022001300041245013400054210006900188300001200257490000700269100001800276700001400294700001700308700001800325700001500343700001600358700001700374700001500391856006600406 2010 eng d a1055790300aGenetic distances within and among species in monophyletic lineages of Parmeliaceae (Ascomycota) as a tool for taxon delimitation0 aGenetic distances within and among species in monophyletic linea a125-1330 v561 aDel-Prado, R.1 aCubas, P.1 aLumbsch, H T1 aDivakar, P.K.1 aBlanco, O.1 ade Paz, Amo1 aMolina, M.C.1 aCrespo, A. uhttp://linkinghub.elsevier.com/retrieve/pii/S105579031000168500751nas a2200229 4500008004100000245016400041210006900205300001300274490000700287100001500294700001600309700001800325700001500343700001300358700001800371700001700389700001300406700001500419700001700434700001800451856005200469 2017 eng d00aCircumscription of the genus Lepra, a recently resurrected genus to accommodate the “Variolaria”-group of Pertusaria sensu lato (Pertusariales, Ascomycota)0 aCircumscription of the genus Lepra a recently resurrected genus ae01802840 v121 aWei, X.-l.1 aSchmitt, I.1 aHodkinson, B.1 aFlakus, A.1 aKukwa, M1 aDivakar, P.K.1 aKirika, P.M.1 aOtte, J.1 aMeiser, A.1 aLumbsch, H T1 aBaruffini, E. uhttp://dx.plos.org/10.1371/journal.pone.018028400645nas a2200193 4500008004100000022001400041245013800055210006900193300001200262490000700274100001800281700001500299700001700314700001800331700001400349700001600363700001700379856005500396 2017 eng d a1560-274500aUsing a temporal phylogenetic method to harmonize family- and genus-level classification in the largest clade of lichen-forming fungi0 aUsing a temporal phylogenetic method to harmonize family and gen a101-1170 v841 aDivakar, P.K.1 aCrespo, A.1 aKraichak, E.1 aLeavitt, S.D.1 aSingh, G.1 aSchmitt, I.1 aLumbsch, H T uhttp://link.springer.com/10.1007/s13225-017-0379-z00638nas a2200205 4500008004100000022001400041245006800055210006100123300001200184490000700196100001600203700001500219700002400234700001400258700001600272700001800288700001500306700001700321856009400338 2011 eng d a0024-282900aThe cetrarioid core group revisited (Lecanorales: Parmeliaceae)0 acetrarioid core group revisited Lecanorales Parmeliaceae a537-5510 v431 aNelsen, M P1 aChavez, N.1 aSackett-Hermann, E.1 aThell, A.1 aRandlane, T1 aDivakar, P.K.1 aRico, V.J.1 aLumbsch, H T uhttps://www.cambridge.org/core/services/aop-cambridge-core/content/view/S002428291100050800617nas a2200169 4500008004100000245013700041210006900178300001000247490000800257100001800265700001800283700001900301700001800320700001700338700001500355856007700370 2016 eng d00aA DNA barcoding approach for identification of hidden diversity in Parmeliaceae (Ascomycota): Parmelia sensu stricto as a case study0 aDNA barcoding approach for identification of hidden diversity in a21-290 v1801 aDivakar, P.K.1 aLeavitt, S.D.1 aMolina, Carmen1 aDel-Prado, R.1 aLumbsch, H T1 aCrespo, A. uhttps://academic.oup.com/botlinnean/article-lookup/doi/10.1111/boj.1235800583nas a2200169 4500008004100000022001400041245012300055210006900178300001200247490000700259100001900266700001800285700001800303700002200321700001500343856005500358 2011 eng d a1439-609200aAnother example of cryptic diversity in lichen-forming fungi: the new species Parmelia mayi (Ascomycota: Parmeliaceae)0 aAnother example of cryptic diversity in lichenforming fungi the a331-3420 v111 aMolina, Carmen1 aDel-Prado, R.1 aDivakar, P.K.1 aSánchez-Mata, D.1 aCrespo, A. uhttp://link.springer.com/10.1007/s13127-011-0060-400664nas a2200181 4500008004100000022001400041245013700055210006900192300001200261490000700273100002300280700001800303700001800321700001400339700002000353700001500373856009400388 2011 eng d a0024-282900aConundrums in species concepts: the discovery of a new cryptic species segregated from Parmelina tiliacea (Ascomycota: Parmeliaceae)0 aConundrums in species concepts the discovery of a new cryptic sp a603-6160 v431 aNúñez-Zapata, J.1 aDivakar, P.K.1 adel Prado, R.1 aCubas, P.1 aHawksworth, D L1 aCrespo, A. uhttps://www.cambridge.org/core/services/aop-cambridge-core/content/view/S002428291100051X00585nas a2200169 4500008004100000022001300041245011600054210006900170300001400239490000800253100001800261700001800279700001800297700001900315700001500334856006600349 2007 eng d a0953756200aUpper cortex anatomy corroborates phylogenetic hypothesis in species of Physconia (Ascomycota, Lecanoromycetes)0 aUpper cortex anatomy corroborates phylogenetic hypothesis in spe a1311-13200 v1111 aDivakar, P.K.1 aAmo de Paz, G1 adel Prado, R.1 aEsslinger, T L1 aCrespo, A. uhttp://linkinghub.elsevier.com/retrieve/pii/S095375620700193100820nas a2200265 4500008004100000022001400041245015000055210006900205300001200274490000700286100001300293700001800306700001500324700001600339700001200355700001300367700002200380700001600402700001400418700001700432700001800449700001500467700001700482856005500499 2016 eng d a1560-274500aTowards a revised generic classification of lecanoroid lichens (Lecanoraceae, Ascomycota) based on molecular, morphological and chemical evidence0 aTowards a revised generic classification of lecanoroid lichens L a293-3040 v781 aZhao, X.1 aLeavitt, S.D.1 aZhao, Z.T.1 aZhang, L.L.1 aArup, U1 aGrube, M1 aPérez-Ortega, S.1 aPrintzen, C1 aŚliwa, L1 aKraichak, E.1 aDivakar, P.K.1 aCrespo, A.1 aLumbsch, H T uhttp://link.springer.com/10.1007/s13225-015-0354-500557nas a2200157 4500008004100000022001400041245013600055210006900191300001000260490000700270100001800277700001700295700001700312700001500329856005500344 2010 eng d a1560-274500aMolecular phylogenetic studies reveal an undescribed species within the North American concept of Melanelixia glabra (Parmeliaceae)0 aMolecular phylogenetic studies reveal an undescribed species wit a47-550 v421 aDivakar, P.K.1 aFigueras, G.1 aHladun, N.L.1 aCrespo, A. uhttp://link.springer.com/10.1007/s13225-010-0027-301942nas a2200229 4500008004100000022001400041245015500055210006900210300001200279490000700291520113100298100001501429700001701444700002001461700001501481700001801496700001601514700001601530700001901546700001301565856013401578 2007 eng d a1055-790300aTesting morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene0 aTesting morphologybased hypotheses of phylogenetic relationships a812-8240 v443 a
Parmeliaceae is the largest family of lichen-forming fungi with more than 2000 species and includes taxa with different growth forms. Morphology was widely employed to distinguish groups within this large, cosmopolitan family. In this study we test these morphology-based groupings using DNA sequence data from three nuclear and one mitochondrial marker from 120 taxa that include 59 genera and represent the morphological and chemical diversity in this lineage. Parmeliaceae is strongly supported as monophyletic and six well-supported main clades can be distinguished within the family. The relationships among them remain unresolved. The clades largely agree with the morphology-based groupings and only the placement of four of the genera studied is rejected by molecular data, while four other genera belong to clades previously unrecognised. The classification of these previously misplaced genera, however, has already been questioned by some authors based on morphological evidence. These results support morphological characters as important for the identification of monophyletic clades within Parmeliaceae.
1 aCrespo, A.1 aLumbsch, H T1 aMattsson, J.-E.1 aBlanco, O.1 aDivakar, P.K.1 aArticus, K.1 aWiklund, E.1 aBawingan, P.A.1 aWedin, M uhttps://fungi.myspecies.info/content/testing-morphology-based-hypotheses-phylogenetic-relationships-parmeliaceae-ascomycota-usi-000730nas a2200217 4500008004100000022001300041245015500054210006900209300001200278490000700290100001500297700001700312700002000329700001500349700001800364700001600382700001600398700001900414700001300433856006600446 2007 eng d a1055790300aTesting morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene0 aTesting morphologybased hypotheses of phylogenetic relationships a812-8240 v441 aCrespo, A.1 aLumbsch, H T1 aMattsson, J.-E.1 aBlanco, O.1 aDivakar, P.K.1 aArticus, K.1 aWiklund, E.1 aBawingan, P.A.1 aWedin, M uhttp://linkinghub.elsevier.com/retrieve/pii/S105579030600485400669nas a2200169 4500008004100000022001300041245015000054210006900204300001200273490000700285100001500292700001800307700001300325700001500338700001300353856013300366 2013 eng d a1055790300aTesting the use of ITS rDNA and protein-coding genes in the generic and species delimitation of the lichen genus Usnea (Parmeliaceae, Ascomycota)0 aTesting the use of ITS rDNA and proteincoding genes in the gener a357-3720 v681 aTruong, C.1 aDivakar, P.K.1 aYahr, R.1 aCrespo, A.1 aClerc, P uhttps://fungi.myspecies.info/content/testing-use-its-rdna-and-protein-coding-genes-generic-and-species-delimitation-lichen-genus